Skip to page content
USDA Forest Service
  
Treesearch

Research & Development Treesearch

 
Treesearch Home
About Treesearch
Contact Us
Research & Development
Forest Products Lab
International Institute of Tropical Forestry
Northern
Pacific Northwest
Pacific Southwest
Rocky Mountain
Southern Research Station
Help
 

Science.gov - We Participate


USA.gov  Government Made Easy


Global Forest Information Service

US Forest Service
P.O. Box 96090
Washington, D.C.
20090-6090

(202) 205-8333

You are here: Home / Search / Publication Information
Bookmark and Share

Publication Information

View PDF (327.0 KB bytes)

Title: The complete chloroplast genome of common walnut (Juglans regia)

Author: ​Hu, Yiheng; Woeste, Keith E.; Dang, Meng; Zhou, Tao; Feng, Xiaojia; Zhao, Guifang; Liu, Zhanlin; Li, Zhonghu; Zhao, Peng.;

Date: 2016

Source: Mitochondrial DNA Part B. http://dx.doi.org/10.1080/23802359.2015.1137804

Publication Series: Scientific Journal (JRNL)

Description: Common walnut (Juglans regia L.) is cultivated in temperate regions worldwide for its wood and nuts. The complete chloroplast genome of J. regia was sequenced using the Illumina MiSeq platform. This is the first complete chloroplast sequence for the Juglandaceae, a family that includes numerous species of economic importance. The chloroplast genome of J. regia was 160 367 bp in length, with 36.11% GC content. It contains a pair of inverted repeats (26 035 bp) which were separated by a large single copy (89 872 bp) and a small single copy region (18 425 bp). A total of 137 genes were annotated, which included 86 protein-coding genes, three pseudogenes (two ycf15 and one infA), 40 tRNA genes and eight rRNA genes. The neighbour-joining phylogenetic analysis with the reported chloroplast genomes showed that common walnut chloroplasts are most closely related to those of the Fagaceae family.

Keywords: Complete chloroplast genome, economic tree, Juglans regia

Publication Notes:

  • We recommend that you also print this page and attach it to the printout of the article, to retain the full citation information.
  • This article was written and prepared by U.S. Government employees on official time, and is therefore in the public domain.
  • This publication may be available in hard copy. Check the Northern Research Station web site to request a printed copy of this publication.
  • Our on-line publications are scanned and captured using Adobe Acrobat. During the capture process some typographical errors may occur. Please contact Sharon Hobrla, shobrla@fs.fed.us if you notice any errors which make this publication unusable.

XML: View XML

Citation:


​Hu, Yiheng; Woeste, Keith E.; Dang, Meng; Zhou, Tao; Feng, Xiaojia; Zhao, Guifang; Liu, Zhanlin; Li, Zhonghu; Zhao, Peng. 2016. The complete chloroplast genome of common walnut (Juglans regia). Mitochondrial DNA Part B. http://dx.doi.org/10.1080/23802359.2015.1137804

 


 [ Get Acrobat ]  Get the latest version of the Adobe Acrobat reader or Acrobat Reader for Windows with Search and Accessibility

USDA logo which links to the department's national site. Forest Service logo which links to the agency's national site.